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Breast
BCM-15003
Model Details
Patient
PDX Model
Histology
Metastasis
Patient Treatment
Patient Information for Model: BCM-15003
Patient Information
Clinical Timeline
Color Keys:
Positive
Negative
N/A
Clinical Information at Collection
Clinical Biomarkers/Mutations at Collection
Pathology Information at Collection
Model Information for Model: BCM-15003
Model Details - Initial Implantation of Patient Tissue
Biomarkers & Mutations
Model Details - Acceptable Conditions for Passaging
Mutations (Cancer Gene Census List)
Show/Hide Columns
The number of models in this collection with mutations in the listed gene;
may include models that are not publicly available for distribution.
The number of models in this collection with mutations at the listed site;
may include models that are not publicly available for distribution.
Total mutations showing: 51
F
P
1
2
3
4
N
E
Rows Per Page
10
15
25
50
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Gene
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Chr
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Start
End
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cDNA Change
Codon Change
Protein Change
TVAF
Gene Mutation Freq.
Site Mutation Freq.
Most Severe Effect
All Effects
Mutation Impact
Transcript ID
ClinVar Clinical Significance
COSMIC ID
gnomAD Non-Cancer AF
dbSNP ID
Gene Mutation Freq.
Site Mutation Freq.
Transcript ID
ClinVar Clinical Significance
COSMIC ID
dbSNP ID
ABL1
chr9
130878451
130878451
G
T
c.1307G>T
gGc/gTc
p.G436V
0.236
9
1
Missense Variant
Missense Variant
MODERATE
ENST00000318560.6
9
1
ENST00000318560.6
AKAP9
chr7
92022864
92022864
A
AAAC
c.4004_4006dup
aaa/aAACaa
p.K1335_L1336insQ
0.5
50
35
In-frame Insertion
In-frame Insertion
MODERATE
ENST00000356239.8
COSV62337888
rs10644111
50
35
ENST00000356239.8
COSV62337888
rs10644111
AR
chrX
67545316
67545328
TGCAGCAGCAGCA
T
c.228_239del
ctGCAGCAGCAGCAg/ctg
p.Q77_Q80del
0.88
48
3
In-frame Deletion
In-frame Deletion
MODERATE
ENST00000374690.9
COSV65960938
48
3
ENST00000374690.9
COSV65960938
ATRX
chrX
77682471
77682471
C
G
c.2785G>C
Gag/Cag
p.E929Q
0.986
59
56
Missense Variant
Missense Variant
MODERATE
ENST00000373344.10
Benign
rs3088074
59
56
ENST00000373344.10
Benign
rs3088074
AXIN2
chr17
65558473
65558473
G
A
c.148C>T
Cct/Tct
p.P50S
0.044
11
1
Missense Variant
Missense Variant
MODERATE
ENST00000307078.10
Benign
COSV61057354
0.474888000000
rs2240308
11
1
ENST00000307078.10
Benign
COSV61057354
rs2240308
CASP9
chr1
15524118
15524118
G
A
c.83C>T
gCc/gTc
p.A28V
0.9
13
1
Missense Variant
Missense Variant
MODERATE
ENST00000333868.10
Benign
COSV61600760
0.503620000000
rs1052571
13
1
ENST00000333868.10
Benign
COSV61600760
rs1052571
CDH11
chr16
64988331
64988331
C
T
c.825G>A
atG/atA
p.M275I
0.448
6
2
Missense Variant
Missense Variant
MODERATE
ENST00000268603.9
Benign
COSV51754932
0.196252000000
rs1130821
6
2
ENST00000268603.9
Benign
COSV51754932
rs1130821
CIITA
chr16
10909070
10909070
A
G
c.2702A>G
cAg/cGg
p.Q901R
0.969
85
84
Missense Variant
Missense Variant
MODERATE
ENST00000618327.4
Benign
0.983235000000
rs7197779
85
84
ENST00000618327.4
Benign
rs7197779
CREB3L2
chr7
137928167
137928170
CTGG
C
c.299_301del
aCCAgt/agt
p.T100del
0.523
49
49
In-frame Deletion
In-frame Deletion
MODERATE
ENST00000330387.11
COSV57791862
rs3217268
49
49
ENST00000330387.11
COSV57791862
rs3217268
DAXX
chr6
33320508
33320508
C
T
c.1123G>A
Gtc/Atc
p.V375I
0.064
4
2
Missense Variant
Missense Variant
MODERATE
ENST00000374542.10
Benign
COSV105853115
0.001283900000
rs61737694
4
2
ENST00000374542.10
Benign
COSV105853115
rs61737694
ECT2L
chr6
138876472
138876472
G
A
c.1579G>A
Gaa/Aaa
p.E527K
0.982
18
1
Missense Variant
Missense Variant; Splice Region Variant
MODERATE
ENST00000541398.6
not_provided
COSV100871781
0.277428000000
rs1529151
18
1
ENST00000541398.6
not_provided
COSV100871781
rs1529151
ERCC2
chr19
45351661
45351661
T
G
c.2251A>C
Aag/Cag
p.K751Q
0.96
48
46
Missense Variant
Missense Variant
MODERATE
ENST00000391945.10
Benign/Likely_benign
COSV67266431
0.322955000000
rs13181
48
46
ENST00000391945.10
Benign/Likely_benign
COSV67266431
rs13181
ETV6
chr12
11869562
11869562
T
C
c.602T>C
cTc/cCc
p.L201P
0.239
1
1
Missense Variant
Missense Variant
MODERATE
ENST00000396373.9
Benign/Likely_benign
COSV67148666
0.004871210000
rs145477191
1
1
ENST00000396373.9
Benign/Likely_benign
COSV67148666
rs145477191
FAM135B
chr8
138153029
138153030
TG
CA
c.1445_1446inv
cCA/cTG
p.P482L
0.982
35
29
Missense Variant
Missense Variant
MODERATE
ENST00000395297.6
rs71505459
35
29
ENST00000395297.6
rs71505459
FANCE
chr6
35455854
35455854
A
C
c.356A>C
cAg/cCg
p.Q119P
0.416
4
1
Missense Variant
Missense Variant
MODERATE
ENST00000229769.3
Uncertain_significance
COSV57691637
0.000063320500
rs781123077
4
1
ENST00000229769.3
Uncertain_significance
COSV57691637
rs781123077
Total mutations showing: 51
F
P
1
2
3
4
N
E
Rows Per Page
10
15
25
50
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CNV
There are no omics data for this model.
Histology Information for Model: BCM-15003
Patient
PDX
ER
H&E
HER2
PR
Metastasis Information for Model: BCM-15003
Patient
PDX
Abdomen
Abdominal cavity
Adrenal Gland
Anterosuperior mediastinum
Ascites
Axillary Lymph Node
Bone
Brain
CTC
Chest
Chest wall
Contralateral Breast
Fallopian tubes
Head
Hilar Node
Hip
Kidney
Leg bone
Leptomeninges
Liver
Lung
Lymph Node
Mediastinum
Metastasis Pleura
Neck
None
Other
Ovary
Pancreas
Paratracheal adenopathy
Pericardium
Peritoneal cavity
Peritoneum
Pleura
Pleural cavity
Pleural effusion
Posterior cervical nodes
Pulmonary
Retrocrural Lymph Node
SVC node
Sacral Spine
Skin
Spine
Spleen
Thymus
Patient Treatment Information for Model: BCM-15003
Event Id
Treatment
Treatment Setting
Age at Start
Age at End
Duration
12
[Docetaxel, Cyclophosphamide]
Adjuvant
66.66
66.85
69 days
14
[Radiation Therapy (RT)]
Adjuvant
66.91
66.99
29 days
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